Table 1 Number of novel transcripts identified from RNA-seq data and number of novel transcripts with translational evidence in oocyst and salivary gland sporozoites using the proteogenomic workflow
| Antisense | Intergenic | Retained intron | 3′ UTR | 5′ UTR | AltORF | ||
|---|---|---|---|---|---|---|---|
| 41 | 427 | 326 | 780 | 790 | / | Novel transcript | |
| Oocyst sporozoite | 1 | 64 | 1 | 22 | 18 | 261 | Novel transcript with peptides |
| Salivary gland sporozoite | 1 | 87 | 4 | 24 | 21 | 261 | |
| Transcript common in both stages | 0 | 21 | 0 | 7 | 8 | 132 | |
| Total unique transcript | 2 | 130 | 5 | 39 | 31 | 390 |